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Femtochemistry and Femtobiology -

Femtochemistry and Femtobiology (eBook)

Ultrafast Events in Molecular Science
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2004 | 1. Auflage
588 Seiten
Elsevier Science (Verlag)
978-0-08-050626-5 (ISBN)
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This book reflects the heights of knowledge of ultrafast chemical processes attained in these early years of the 21st century : the latest research in femtosecond and picosecond molecular processes in Chemistry and Biology, carried out around the world, is described here in more than 110 articles. The results were presented and discussed at the VIth International Conference on Femtochemistry, in Paris, France, from July 6 to July 10, 2003. The articles published here were reviewed by referees selected from specialists in the Femtochemistry community, guaranteeing a collective responsability for the quality of the research reported in the next 564 pages. Femtochemistry is an ever-growing field, where new research areas are constantly opening up, and one which both stimulates and accompanies the development of ultrafast technologies.

The increasing interest in femtobiology and chemistry at the frontier with biology is an obvious indicator of the present impact of life sciences in our society. New materials and reactions at surfaces are also some of the relatively new topics that promise rapid developments. New methodologies and technologies for probing and following in real time molecular dynamical phenomena have appeared within the last ten years or so. These methods, based on multidimensional IR spectroscopies, ultrafast X-ray and electron diffraction techniques, are well represented in this book. Of ever-improving performance, they are now applied to the characterization of structural dynamics of an increasing number of chemical and biological systems.

This book reports the state of research in Femtochemistry and Femtobiology presented at Paris, at the Maison de la Chimie, in July 2003, representing the tenth anniversary of the conference.

* Overview of the most recent research on ultrafast events
* Application of new methodologies on chemical and biological systems
* Contributions by key players in the field
This book reflects the heights of knowledge of ultrafast chemical processes attained in these early years of the 21st century : the latest research in femtosecond and picosecond molecular processes in Chemistry and Biology, carried out around the world, is described here in more than 110 articles. The results were presented and discussed at the VIth International Conference on Femtochemistry, in Paris, France, from July 6 to July 10, 2003. The articles published here were reviewed by referees selected from specialists in the Femtochemistry community, guaranteeing a collective responsability for the quality of the research reported in the next 564 pages. Femtochemistry is an ever-growing field, where new research areas are constantly opening up, and one which both stimulates and accompanies the development of ultrafast technologies. The increasing interest in femtobiology and chemistry at the frontier with biology is an obvious indicator of the present impact of life sciences in our society. New materials and reactions at surfaces are also some of the relatively new topics that promise rapid developments. New methodologies and technologies for probing and following in real time molecular dynamical phenomena have appeared within the last ten years or so. These methods, based on multidimensional IR spectroscopies, ultrafast X-ray and electron diffraction techniques, are well represented in this book. Of ever-improving performance, they are now applied to the characterization of structural dynamics of an increasing number of chemical and biological systems.This book reports the state of research in Femtochemistry and Femtobiology presented at Paris, at the Maison de la Chimie, in July 2003, representing the tenth anniversary of the conference.* Overview of the most recent research on ultrafast events* Application of new methodologies on chemical and biological systems* Contributions by key players in the field

Cover 1
Preface 5
Contents 9
PART 1: GAS PHASE AND CLUSTERS 19
Chapter 1. Ultrafast electron diffraction and transient complex structures - From gas phase to crystallography 21
Chapter 2. Experimental and theoretical studies of pump-probe electron diffraction: time dependent and state-specific signatures in small cyclic molecules 37
Chapter 3. Cluster size effects on bound excited states of SO2 43
Chapter 4. Micro solvation dynamics at the passage of conical intersections observed in argon clusters of excited tetrakis(dimethylamino)ethylene 47
Chapter 5. Femtosecond photon echo measurements of electronic coherence relaxation of I2 in the presence of He, Ar, N2, O2, C3H8 51
Chapter 6. Probing reaction dynamics with Rydberg states: The ring opening reaction of 1,3- cyclohexadiene 55
Chapter 7. Femtosecond photoelectron spectroscopy of trans-Stilbene 59
Chapter 8. Azobenzene photoisomerization: Two states and two relaxation pathways explain the violation of Kasha's rule 63
Chapter 9. Comparison of ultrafast photoninduced processes in indole (NH3)n and indole (H2O)n clusters 67
Chapter 10. How to disentangle evaporation and picosecond excited-state dynamics in molecular clusters 71
Chapter 11. Vibrational relaxation of photoexcited Na3F 75
Chapter 12. Femtosecond infrared strong field ionisation of metal clusters produced by kHz laser ablation 79
Chapter 13. The structure of carboxyclic acid dimers: results by time-resolved femtosecond degenerate four-wave mixing spectroscopy 83
Chapter 14. Collision induced rotational energy transfer. A new scaling law probed by fs CARS 87
Chapter 15. Different schemes and recent results for high-resolution rotational coherence spectroscopy with picosecond and femtosecond laser pulses 91
PART 2: QUANTUM CONTROL 95
Chapter 16. Shaped laser pulses acting as photonic reagents 97
Chapter 17. Energy flow in photosynthetic light harvesting: spectroscopy and control 109
Chapter 18. Control of nonlinear optical excitation with multiphoton intrapulse interference 113
Chapter 19. Infrared femtochemistry: Vibrationally induced molecular dissociation and its control employing shaped fs MIR laser pulses 121
Chapter 20. Spectrally resolved femtosecond two-colour three-pulse photon echoes for studies of molecular dynamics: influence of pulse wavelengths and pulse sequence 125
Chapter 21. Closed loop optimization of the ionization process in NaK. Learning from the optimal pulse shape 129
Chapter 22. Femtosecond dynamics of Nal and CsI aggregated with CH3CN 133
Chapter 23. Control of the production of highly charged ions in femtosecond laser cluster fragmentation 137
Chapter 24. Free phase optimization of CpMn(CO)+2 as a fragment of CpMn(C0)3 by means of shaped femtosecond laser pulses 141
Chapter 25. Adiabatic control of bond distance in selective non Franck-Condon transitions 145
Chapter 26. Adiabatic rapid passage in molecules in solution excited by an intense ultrashort chirped pulse 149
Chapter 27. Ultrafast non-Franck-Condon transitions: is it possible ? 153
Chapter 28. Quantum control beyond spectral interference and population control: Can resonant intense laser pulses freeze the population ? 157
Chapter 29. Ultrafast time reversal mirror at 800 nm based on photosensitive naphthalocyanine doped solids 161
PART 3: HYDROGEN-BOND DYNAMICS, WATER AND PROTON TRANSFER 165
Chapter 30. Ultrafast motion of water molecules near ions 167
Chapter 31. Ultrafast vibrational dynamics of hydrogen-bonded dimers in solution 175
Chapter 32. 2D photon-echo spectroscopy of hydrogen-bond dynamics in liquid water 183
Chapter 33. Three-dimensional spectroscopy of vibrational energy relaxation in liquids 187
Chapter 34. On ultrafast IR spectroscopy in water 195
Chapter 35. Isotope effect on the IVR dynamics after ultrafast IR excitation of the hydrogen bond in salicylaldimine 199
Chapter 36. Femtosecond solvation dynamics of hydrogen-bonding complexes 203
Chapter 37. Bimodal intermolecular proton transfer in water: photoacid-base pairs studied with ultrafast infrared spectroscopy 207
Chapter 38. Symmetry breaking wavepacket motion and absence of deuterium isotope effect in ultrafast excited state proton tranfer 211
Chapter 39. Excited-state proton transfer dynamics of 6-hydroxyquinoline in acidic and alkaline aqueous solutions 215
Chapter 40. Ultrafast intermolecular proton transfer from 10-hydroxy-camptothecin 219
Chapter 41. Reaction dynamics of aqueous peroxynitrite and peroxynitrous acid 225
PART 4: SOLVATION PHENOMENA, FLUIDS AND LIQUIDS 229
Chapter 42. Dynamics of water at surface of complex systems: Study of aqueous micelles and proteins 231
Chapter 43. The solvated electron in methanol. Novel time- and frequency-resolved pumpprobe spectroscopy of short-lived precursors 239
Chapter 44. Femtosecond dynamics of the solvated electron in water studied by time-resolved Raman Spectroscopy 243
Chapter 45. Femtosecond transient spectroscopy of the photoionization of indole in water 247
Chapter 46. Short-time water caging and transient electron-OH couplings in liquid phase 251
Chapter 47. Fluorescence dynamics of coumarin C522 in water and in cyclodextrin cavity 255
Chapter 48. Solvation dynamics of electron in ethylene glycol at 300 K 259
Chapter 49. Solvation dynamics of coumarin 153 in benzene-acetonitrile and benzene-methanol mixtures: a Molecular Dynamics study 263
Chapter 50. Femtosecond dynamics of excess electrons in a molten Na-NaBr system 267
Chapter 51. Electronic solvation dynamics in non-polar supercritical fluids 271
Chapter 52. Femtosecond photolysis of CH2I2 in supercritical fluids: Competition between photodissociation and isomerization 275
Chapter 53. Femtosecond degenerate four-wave mixing of cycloalkanes 279
Chapter 54. Femtosecond liquid dynamics studied by two–dimensional Raman spectroscopy 283
PART 5: RELAXATION AND REACTIONS IN SOLUTION 287
Chapter 55. The impact of different molecular environments and chemical substitution on timescales of intramolecular vibrational energy redistribution in aromatic molecules 289
Chapter 56. Dihydroazulene molecular switches: Via ultrafast spectroscopy to the first bidirectional switch 297
Chapter 57. The ultrafast dynamics of some photochromic naphthopyrans 301
Chapter 58. Femtochemistry of organic Peroxides: Ultrafast formation and decarboxylation of carbonyloxy radicals 305
Chapter 59. Femto- and nano-second photoionization of sterically hindered phenols in nonprotic solvents–Antithetical product formation 309
Chapter 60. Coherent nuclear motion of reacting excited-state molecules in solution observed by ultrafast two color pump-probe spectroscopy 313
Chapter 61. Probing of coherent oscillations by multiphoton ionization 317
Chapter 62. Coherences in the time-resolved fluorescence of the TCNE-HMB complex: simulation versus experiment 321
Chapter 63. Quantum-dynamical modeling of ultrafast processes in complex molecular systems : multiconfigurational system-bath dynamics using Gaussian wavepackets 325
Chapter 64. A simple approach for the calculation of femtosecond pump-probe spectra for electronically nonadiabatic systems 329
Chapter 65. Ultrafast charge separation and radiationless relaxation processes from S2 excited electronic states of directly linked Zinc-porphyrin-acceptor dyads 333
Chapter 66. Femtosecond times-resolved studies on bimolecular electron transfer processes 337
Chapter 67. Ultrafast phtoinduced charge transfer in fluorinated derivatives of DMABN 341
Chapter 68. Influence of solute-solvent interactions on the quenching dynamics of perylene derivatives in an electron donating solvent 345
Chapter 69. Effect of excitation wavelength on the charge recombination dynamics of excited donor acceptor complexes 349
PART 6: TIME-RESOLVED X-RAYS 353
Chapter 70. Time-resolved x-ray diffraction from small molecules in solution 355
Chapter 71. Time-dependent x-ray scattering signal of laser heated liquids 367
Chapter 72. Structural dynamics and electronic structure changes probed with lasers and X-rays 371
PART 7: PROTEIN DYNAMICS 381
Chapter 73. Multidimensional and dual frequency infrared analogues of NMR: Applications to peptides and isotopomers of secondary structures 383
Chapter 74. Ultrafast conformational dynamics in light triggered cyclic peptides 391
Chapter 75. Femtosecond visible pump–midinfrared probe setup for the study of protein dynamics. Isomerization in Photoactive Yellow Protein 399
Chapter 76. Transient two-dimensional infrared spectroscopy–towards measuring ultrafast structural dynamics 405
Chapter 77. Reaction driven modes in carboxymyoglobin: pathway of force transduction for functionally relevant protein motions 409
Chapter 78. Ultrafast studies of ferric complexes of Hemoglobin I from Lucina pectinata 413
PART 8: PRIMARY PROCESSES IN PHOTOBIOLOGY 417
Chapter 79. The mechanism of energy transfer and trapping in Photosystem I 419
Chapter 80. Ultrafast photoreaction dynamics in protein nanospaces (PNS) as revealed by fs fluorescence dynamics studies on photoactive yellow protein (PYP) and related systems 427
Chapter 81. Isomerization process in the native and denatured photoactive yellow protein probed by subpicosecond absorption spectroscopy 435
Chapter 82. Chemical structure effect on the excited-state relaxation dynamics of the PYP chromophore 439
Chapter 83. Ultrafast excited state dynamics in green fluorescent protein chromophore 443
Chapter 84. Ultrafast dynamics in the excited state of wild-type Green Fluorescent Protein 451
Chapter 85. Excited-state dynamics in the Green Fluorescent Proteins : the cases of wild type, UV-Mutant, and isolated synthetic analogues of the GFP chromophore 455
Chapter 86. Fast excited-state reaction in the photoreceptor pigment-protein complex of the ciliate Blepharisma japonicum 459
Chapter 87. Excited state dynamics of the carotenoid peridinin 463
Chapter 88. Pump-probe and pump-deplete-probe spectroscopy on carotenoids with N=9-15 471
Chapter 89. Ultrafast photophysics of the protonated Schiff base of retinal in alcohols studied by femtosecond fluorescence up-conversion 475
PART 9: DYNAMICS IN DNA, POLYMERS AND MACROMOLECULES 479
Chapter 90. Ultrafast excited-state dynamics in DNA and RNA polymers 481
Chapter 91. Femtosecond fluorescence studies of DNA constituents 489
Chapter 92. Ultrafast vibrational spectroscopy on DNA 493
Chapter 93. Ultrafast dynamics of normal and damaged DNA 497
Chapter 94. Sub-5-fs pulse generation from a noncollinear optical parametric amplifier and its application to ultrafast dynamics in polymers 501
Chapter 95. Unveiling electronic phase relaxation in a strongly disordered conjugated polymer 509
Chapter 96. Energy transfer in light-harvesting Zn porphyrin dendrimers 513
Chapter 97. Femtosecond fluorescence upconversion studies of chiral self-assembled supramolecules in solution 517
Chapter 98. Energy transfer process in dendrimers containing a perylene-terrylene donoracceptor system investigated by femtosecond multicolor transient absorption spectroscopy 521
PART 10: SURFACES, INTERFACES, NANOSTRUCTURES AND SOLIDS 525
Chapter 99. Femtosecond time-resolved studies on spectral sensitization of AgBr nanocrystals 527
Chapter 100. Ultrafast scattering of electrons in TiO2 535
Chapter 101. Influence of molecular spacers on ultrafast heterogeneous electron transfer 539
Chapter 102. Stepwise electron injection in the dye-sensitized nanocrystalline films of ZnO and Ti02 with novel coumarin dye 543
Chapter 103. Heterogeneous electron transfer probed with femtosecond two-photon photoemission spectroscopy 547
Chapter 104. Time resolved ultrafast energy transfer from electrons photoexcited in Pt(111) to adsorbed CO during photodesorption 551
Chapter 105. Femtosecond fluorescence up-conversion microscopy: a new method to study ultrafast dynamics in microstructures 555
Chapter 106. Solvation dynamics at water-Zr02 interfaces 559
Chapter 107. Time-resolved absorption spectroscopy of metal nanoparticles in colloidal solution 563
Chapter 108. Determination of femtosecond dephasing times of organic dyes confined in a single spherical microparticle 567
Chapter 109. Femtosecond pump-probe investigation of primary photoinduced processes in C60/Sn nanostrutures 571
Chapter 110. Elementary reaction steps of iodine enclosed into zeolites 575
Chapter 111. Nonlinear spectroscopy study of vibrational self-trapping in hydrogen bonded crystals 579
AUTHOR INDEX 583

Erscheint lt. Verlag 16.4.2004
Sprache englisch
Themenwelt Sachbuch/Ratgeber
Naturwissenschaften Chemie Physikalische Chemie
Naturwissenschaften Physik / Astronomie Angewandte Physik
Technik
ISBN-10 0-08-050626-7 / 0080506267
ISBN-13 978-0-08-050626-5 / 9780080506265
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