A Practical Introduction to the Simulation of Molecular Systems
Seiten
1999
Cambridge University Press (Verlag)
978-0-521-58129-5 (ISBN)
Cambridge University Press (Verlag)
978-0-521-58129-5 (ISBN)
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This book provides a practical introduction to the techniques available for the simulation of molecular systems. It includes a library of program modules written in Fortran 90 with which the simulations were performed and will be of interest to advanced undergraduates, graduate students and researchers who use molecular simulation techniques.
This book provides a practical introduction to the range of different techniques available for the simulation of molecular systems. The text includes a library of program modules written in Fortran 90 with which the simulations discussed in the text were performed. Each chapter describes a general class of methods or algorithms, and then illustrates their use with example programs, written using the module library. Topics covered include energy functions, geometry optimization and reaction path location techniques, normal mode analysis, molecular dynamics and Monte Carlo simulations and free energy calculations. This book will be of interest to advanced undergraduates, graduate students and researchers who use molecular simulation techniques, particularly in theoretical and computational chemistry, biophysics and computational molecular physics.
This book provides a practical introduction to the range of different techniques available for the simulation of molecular systems. The text includes a library of program modules written in Fortran 90 with which the simulations discussed in the text were performed. Each chapter describes a general class of methods or algorithms, and then illustrates their use with example programs, written using the module library. Topics covered include energy functions, geometry optimization and reaction path location techniques, normal mode analysis, molecular dynamics and Monte Carlo simulations and free energy calculations. This book will be of interest to advanced undergraduates, graduate students and researchers who use molecular simulation techniques, particularly in theoretical and computational chemistry, biophysics and computational molecular physics.
1. Preliminaries; 2. The coordinate file; 3. Operations on coordinates; 4. The energy function; 5. Setting up the molecular mechanics system; 6. Finding stationary points and reaction paths; 7. Normal mode analysis; 8. Molecular dynamics simulations I; 9. More on non-bonding interactions; 10. Molecular dynamics simulations II; 11. Monte Carlo simulations; 12. Miscellaneous topics; Appendix. The DYNAMO module library.
| Erscheint lt. Verlag | 5.8.1999 |
|---|---|
| Verlagsort | Cambridge |
| Sprache | englisch |
| Maße | 182 x 255 mm |
| Gewicht | 820 g |
| Themenwelt | Naturwissenschaften ► Chemie ► Physikalische Chemie |
| ISBN-10 | 0-521-58129-X / 052158129X |
| ISBN-13 | 978-0-521-58129-5 / 9780521581295 |
| Zustand | Neuware |
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