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Algebraic Biology

Third International Conference, AB 2008, Castle of Hagenberg, Austria, July 31-August 2, 2008, Proceedings

Katsuhisa Horimoto, Georg Regensburger, Markus Rosenkranz, Hiroshi Yoshida (Herausgeber)

Buch | Softcover

XII, 245 Seiten

2008 | 2008
Springer Berlin (Verlag)
978-3-540-85100-4 (ISBN)

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This volume contains the proceedings of the Third International Conference on Algebraic Biology (AB 2008). Jointly organized by the National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, and the Research Institute for Symbolic Computation (RISC), Hagenberg, Austria, it was held from July 31 to August 2, 2008 in the Castle of Hagenberg. Algebraic biology is an interdisciplinary forum for research on all aspects of applying symbolic computation in biology. The ?rst conference on algebraic biology (AB 2005) was held November 28-30, 2005 in Tokyo, the second during July 2-4, 2007 in Hagenberg. The AB conference series is intended as a bridge between life sciences and symbolic computation: On the one hand, new insights inbiologyarefoundbypowerfulsymbolicmethods;ontheotherhand,biological problems suggestnew algebraicstructures andalgorithms.While this pro?le has been established in the previous proceedings, the papers in the present volume demonstrate the continuous growth of algebraic biology. We received 27 submissions from 14 countries (Australia, Austria, Canada, China, Colombia, France, Germany, Italy, Japan, Norway, Russia, Switzerland, UK, USA), and 14 papers were accepted for publication. Each submission was assigned to at least three ProgramCommittee members, who carefully reviewed the papers, in many cases with the help of external referees. The reviews were discussedby the ProgramCommittee for oneweekvia the EasyChairconference management system.

Algorithms for Inference, Analysis and Control of Boolean Networks.- Tutorial on Model Checking: Modelling and Verification in Computer Science.- Differential Algebra and System Modeling in Cellular Biology.- Hybrid Semantics for Stochastic ?-Calculus.- Applying a Rigorous Quasi-Steady State Approximation Method for Proving the Absence of Oscillations in Models of Genetic Circuits.- On the Computational Power of Biochemistry.- The Geometry of the Neighbor-Joining Algorithm for Small Trees.- Neural Algebra and Consciousness: A Theory of Structural Functionality in Neural Nets.- An Algorithm for Qualitative Simulation of Gene Regulatory Networks with Steep Sigmoidal Response Functions.- Property Preservation along Embedding of Biological Regulatory Networks.- Process Algebra Models of Population Dynamics.- Algebraic Analysis of Bifurcation and Limit Cycles for Biological Systems.- The Smallest Multistationary Mass-Preserving Chemical Reaction Network.- Local Structure and Behavior of Boolean Bioregulatory Networks.- Investigating Generic Methods to Solve Hopf Bifurcation Problems in Algebraic Biology.- An Improved Algorithm for Detecting a Singleton Attractor in a Boolean Network Consisting of AND/OR Nodes.- Constructing a Knowledge Base for Gene Regulatory Dynamics by Formal Concept Analysis Methods.

Erscheint lt. Verlag	18.7.2008
Reihe/Serie	Lecture Notes in Computer Science
Reihe/Serie	Theoretical Computer Science and General Issues
Zusatzinfo	XII, 245 p.
Verlagsort	Berlin
Sprache	englisch
Maße	155 x 235 mm
Gewicht	399 g
Themenwelt	Mathematik / Informatik ► Informatik ► Software Entwicklung
	Mathematik / Informatik ► Informatik ► Theorie / Studium
	Informatik ► Weitere Themen ► Bioinformatik
Schlagworte	algebraic methods • Artificial Intelligence • Automata • automated reasoning • Biology • Calculi • cellular programming • combinatorics • Computer • Computer Algebra • Differential Algebra • Distributed Computing • Dynamic systems • Formal Languages • formal methods • gene expression • Gene Ontology • gene regulation • Genetic algorithms • genomics • graph theory • grid computing • group theory • Hardcover, Softcover / Informatik, EDV/Informatik • HC/Informatik, EDV/Informatik • Hybrid Systems • Life Sciences • local analysis • Logic • Mathematical Modeling • model identification • Modeling • Molecular Evolution • molecular sequence analysis • molecular structure analysis • Network inference • Parallel Programming • Polynomial Functions • Proteomics • Rewriting • Symbolic analysis • System Analysis and Design • system synthesis • System Verification • Term Rewriting • transformations of models • Validation • verification
ISBN-10	3-540-85100-3 / 3540851003
ISBN-13	978-3-540-85100-4 / 9783540851004
Zustand	Neuware