Multiple Sequence Alignment Methods
Humana Press Inc. (Verlag)
978-1-62703-645-0 (ISBN)
Authoritative and practical, Multiple Sequence Alignment Methods provides a readily available resource which will allow practitioners to experiment with different algorithms and find the particular algorithm that is of most use in their application.
Dynamic Programming.- Heuristic Alignment Methods.- Objective Functions.- An Appraisal of Benchmarks for Multiple Sequence Alignment.- BLAST and FASTA Similarity Searching for Multiple Sequence Alignment.- Clustal Omega, Accurate Alignment of Very Large Numbers of Sequences.- T-COFFEE: Tree-Based Consistency Objective Function for Alignment Evaluation.- MAFFT: Iterative Refinement and Additional Methods.- Multiple Sequence Alignment Using Probcons and Probalign.- Phylogeny-Aware Alignment with PRANK.- GramAlign: Fast Alignment Driven by Grammar-Based Phylogeny.- Multiple Sequence Alignment with DIALIGN.- PicXAA: A Probabilistic Scheme for Finding the Maximum Expected Accuracy Alignment of Multiple Biological Sequences.- Multiple Protein Sequence Alignment with MSAProbs.- Large-Scale Multiple Sequence Alignment and Tree Estimation Using SATé.- PRALINE: A Versatile Multiple Sequence Alignment Toolkit.- PROMALS3D: Multiple Protein Sequence Alignment Enhanced with Evolutionary and 3-Dimensional Structural Information.- MSACompro: Improving Multiple Protein Sequence Alignment by Predicted Structural Features.
Reihe/Serie | Methods in Molecular Biology ; 1079 |
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Zusatzinfo | 47 Illustrations, color; 16 Illustrations, black and white; XII, 287 p. 63 illus., 47 illus. in color. |
Verlagsort | Totowa, NJ |
Sprache | englisch |
Maße | 178 x 254 mm |
Themenwelt | Informatik ► Weitere Themen ► Bioinformatik |
Naturwissenschaften ► Biologie ► Genetik / Molekularbiologie | |
Schlagworte | Alignment algorithms • Bioinformatics • Biological sequences • Computational Biology |
ISBN-10 | 1-62703-645-8 / 1627036458 |
ISBN-13 | 978-1-62703-645-0 / 9781627036450 |
Zustand | Neuware |
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